Research Results

Comprehensive population genetics analysis using cross-validated K=10 optimal model

๐Ÿ”ฌ Cross-Validated Analysis Complete

๐ŸŽฏ Key Discoveries

๐Ÿ“Š Population Genetics Approach

  • Multi-component ancestry analysis (64.3% Middle Eastern/Levantine)
  • Ancient DNA database integration for population comparison
  • Statistical validation through cross-validation methodology
  • Comprehensive population structure analysis beyond regional categories

โœ… Analytical Results

  • Validated relationship to I16327.AG (Bronze/Iron Age Levant)
  • Cross-validated K=10 optimal ancestral component model
  • Multi-method convergence validation (ADMIXTURE + IBD + PCA)
  • Comprehensive tri-continental ancestry profile

๐Ÿงช Technical Specifications

Cross-Validation Results: K=10 model optimal with CV error 0.51482

Dataset Composition: 143,495 high-quality SNPs across 61,816 samples

Ancient DNA Integration: AADR database with multi-method validation framework

๐Ÿงฌ Ancestral Components (K=10 Cross-Validated Model)

Component 6
64.3%
Middle Eastern/Levantine - Primary ancestral component validated through Bronze/Iron Age populations
Component 3
23.4%
Caucasus/Armenian - Secondary ancestral contribution from Caucasus populations
Component 2
10.3%
African/Sub-Saharan - Significant ancestral component from African populations
Component 8
1.9%
European - Minor European ancestral contribution
Other Components
0.1%
Residual - Other minor ancestral components

๐Ÿ”ฌ Component Analysis

Primary Pattern: The 64.3% Middle Eastern/Levantine component represents the dominant ancestral contribution, validated through population genetic analysis of Bronze/Iron Age samples.

Methodological Framework: K=10 model selected through cross-validation (CV=0.51482) using 143,495 high-quality SNPs across 61,816 samples, with multi-method validation including IBD and PCA convergence.

๐Ÿบ Ancient Population Analysis

I16327.AG
Closest Ancient Match
0.0206
Genetic Distance
Levant
Geographic Region
Bronze/Iron Age
Archaeological Period

๐Ÿ“Š Population Genetic Analysis

Analysis identifies I16327.AG from Bronze/Iron Age Levant as the closest ancient population match (genetic distance: 0.0206). This relationship is validated through multi-method convergence including ADMIXTURE, IBD analysis, and PCA.

๐Ÿงช Validation Framework

Multi-Method Validation: ADMIXTURE genetic distances confirmed through IBD segment analysis and PCA convergence

Archaeological Context: Bronze/Iron Age Levantine populations representing regional genetic continuity

Statistical Confidence: Cross-validated through K=10 optimal model with CV error 0.51482

๐Ÿ”ฌ Analysis Overview

1. Data Preparation

Raw genomic data quality filtered and merged with 61,816 reference samples from curated databases

2. ADMIXTURE Analysis

Cross-validation testing across K-values, optimal K=10 selected with CV error 0.51482

3. Multi-Method Validation

Independent verification through IBD analysis and PCA convergence for statistical confidence

4. Ancient Population Analysis

Genetic distance calculations and archaeological context integration for population relationships

๐Ÿงช Technical Specifications

SNP Coverage: 143,495 high-quality autosomal markers

Reference Panel: AADR + Human Origins + SGDP + 1000 Genomes + curated populations

Cross-Validation: K=10 optimal model with CV error 0.51482

Validation Framework: Multi-method convergence (ADMIXTURE + IBD + PCA)

โš ๏ธ Preliminary Archaic Analysis

Experimental: Initial hap-IBD analysis protocols suggest potential archaic human DNA signatures in Chr1-5 data. Results are preliminary and require extensive validation.

Note: Archaic DNA detection methods are experimental and not yet scientifically validated. All findings should be considered preliminary research only.

๐Ÿš€ Explore the Complete Analysis

Dive deeper into the methodology, compare with other approaches, or learn about the science behind genetic archaeology.

View Methodology About the Project FAQ